The clubs were the site of violent fights, including a brawl between Drake and Chris Brown.
A 23-year-old woman was smashed in the face with a bottle at SoHo club Greenhouse, police said.
A 63-year-old closed his eyes on the subway for a second and was robbed of his phone, he told police.
One of the teens who attacked a 64-year-old woman claimed to have a knife, police said.
The owners of Greenhouse and W.I.P. failed to keep the hotspots safe, a judge said.
Jorge Sanchez, 27, is accused of exchanging stolen Sephora products for store credit.
Four handbags thefts have been reported at the troubled club in the past month.
Lequan Clark, 24, a former promoter at Greenhouse, was charged with raping a woman in July 2010.
Model Romain Julien is suing musicians Chris Brown and Drake over the brawl at a SoHo nightclub.
The Hudson Square clubs WIP and Greenhouse will reopen Tuesday, a statement from the owners said.
Police tried to shut down the WiP club for months before Chris Brown and Drake allegedly scuffled there.
The State Liquor Authority revoked the liquor license of WIP and Greenhouse after a wild fight there.
NBA star Tony Parker said glass cut 99 percent of his eye during a wild club fight at WiP.
A bouncer was clawed in the face at the Hudson Square club and another man was shot and killed outside.
Rapper Meek Mill said other people at the Hudson Square club WIP started the melee.
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